get_genes_in_region()
Usage
get_genes_in_region(
chr = chr,
xmin = xmin,
xmax = xmax,
protein_coding_only = F,
show_exons = F,
show_genes = T,
build = 38,
region = NULL
)Arguments
- chr
A string, chromosome (e.g. chr16)
- xmin
An integer representing genetic position
- xmax
An integer representing genetic position
- protein_coding_only
A logical scalar, if TRUE, only protein coding genes are used for annotation
- show_exons
Deprecated : A logical scalar, show exons instead of genes (default show_exons=FALSE)
- show_genes
A logical scalar, show genes instead of exons (default show_genes=FALSE)
- build
A number representing the genome build or a data frame. Set to 37 to change to build (GRCh37). The default is build 38 (GRCh38).
- region
A string representing the genetic region (e.g chr16:50693587-50734041)